Skip to main content

The Database of Macromolecular Motions: new features added at the decade mark


Abstract The database of molecular motions, MolMovDB (http://molmovdb.org), has been in existence for the past decade. It classifies macromolecular motions and provides tools to interpolate between two conformations (the Morph Server) and predict possible motions in a single structure. In 2005, we expanded the services offered on MolMovDB. In particular, we further developed the Morph Server to produce improved interpolations between two submitted structures. We added support for multiple chains to the original adiabatic mapping interpolation, allowing the analysis of subunit motions. We also added the option of using FRODA interpolation, which allows for more complex pathways, potentially overcoming ... (more)
Created Date 2006-01-01
Contributor Flores, Samuel (Author) / Echols, Nathaniel (Author) / Milburn, Duncan (Author) / Hespenheide, Brandon (ASU author) / Keating, Kevin (Author) / Lu, Jason (Author) / Wells, Stephen (ASU author) / Yu, Eric Z. (Author) / Thorpe, Michael (ASU author) / Gerstein, Mark (Author) / College of Liberal Arts and Sciences / Department of Physics / Center for Biological Physics / Department of Chemistry and Biochemistry
Series NUCLEIC ACIDS RESEARCH
Type Text
Extent 6 pages
Language English
Identifier DOI: 10.1093/nar/gkj046 / ISSN: 1362-4962 / ISSN: 0305-1048
Copyright
Reuse Permissions
Citation Flores, S., Echols, N., Milburn, D., Hespenheide, B., Keating, K., Lu, J., . . . Gerstein, M. (2006). The Database of Macromolecular Motions: new features added at the decade mark. Nucleic Acids Research, 34(90001). doi:10.1093/nar/gkj046
Note The final version of this article, as published in Nucleic Acids Research, can be viewed online at: https://academic.oup.com/nar/article-lookup/doi/10.1093/nar/gkj046
Collaborating Institutions ASU Library
Additional Formats MODS / OAI Dublin Core / RIS


  Database of Macromolecular_2016.pdf
882.0 KB application/pdf
Download Count: 329